Genome | Arabidopsis | Rice | Maize | Wheat |
---|---|---|---|---|
Version | TAIR10 | MSU7 | AGPv4 | CS1.0 |
Size | 119.7 Mb | 374.5 Mb | 2134.4 Mb | 14,547.3 Mb |
Original memory (1 threada) | 0.37 Gbyte | 0.55 Gbyte | 5.00 Gbyte | 11.88 Gbyteb |
Parallel memory (36 threadsa) | 0.10 Gbyte | 0.12 Gbyte | 0.82 Gbyte | 17.67 Gbyte |
Original time (1 thread) | 0.58 h | 2.1 h | 448.5 h | 10,169.3 hb |
Parallel time (36 threads) | 6.4 min | 2.6 min | 10.3 min | 71.8 min |
Speed up | 5.4 X | 48.5 X | 2613 X | 8498 X |
# of LTR candidates (1 thread) | 226 | 2851 | 60,165 | 231,043 |
# of LTR candidates (36 threads) | 226 | 2834 | 59,658 | 237,352 |
% difference in candidate # | 0.00% | 0.60% | 0.84% | −2.73% |