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Table 4 Number of human and chimpanzee INDELs associated with noninterspersed sequences

From: Characterization and potential functional significance of human-chimpanzee large INDEL variation

 

Human gaps

Chimpanzee gaps

   

Noninterspersed sequence subclass

CIs

HDs

CIs + HDs

HIs

CDs

HIs + CDs

Total insertions (CIs + HIs)

Total deletions (CDs + HDs)

Total INDELs (CIs + HIs + CDs + HDs)

TRs

720

546

1,266

814

520

1,334

1,534

1,066

2,600

USs

1,156

1,767

2,923

1,145

1,267

2,412

2,301

3,034

5,335

Total

1,876

2,313

4,189

1,959

1,787

3,746

3,835

4,100

7,935

  1. CD = chimpanzee deletion; CI = chimpanzee insertion; HD = human deletion; HI = human insertion; INDEL = insertion and deletion; TR = tandem repeat; US = unique sequence. Using Rhesus macaque as an out-group, we characterized INDEL variation as CDs, CIs, HDs or HIs.
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Mobile DNA

ISSN: 1759-8753